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pom.xml
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125 lines (104 loc) · 3.29 KB
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<artifactId>biojava-ffx</artifactId>
<groupId>org.biojava</groupId>
<version>4.1.1-SNAPSHOT</version>
</parent>
<artifactId>biojava-structure-ffx</artifactId>
<name>biojava-structure-ffx</name>
<description>The protein structure modules of BioJava.</description>
<dependencies>
<dependency>
<groupId>org.biojava</groupId>
<artifactId>biojava-alignment-ffx</artifactId>
<version>4.1.1-SNAPSHOT</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>org.biojava</groupId>
<artifactId>biojava-core-ffx</artifactId>
<version>4.1.1-SNAPSHOT</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>java3d</groupId>
<artifactId>vecmath</artifactId>
<version>1.3.1</version>
</dependency>
<!-- logging dependencies (managed by parent pom, don't set versions or scopes here) -->
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
</dependency>
<!-- binding for log4j2, scope=runTime set in parent pom -->
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-slf4j-impl</artifactId>
</dependency>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-api</artifactId>
</dependency>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-core</artifactId>
</dependency>
<!-- Testing related dependencies -->
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<scope>test</scope>
</dependency>
<dependency>
<groupId>xmlunit</groupId>
<artifactId>xmlunit</artifactId>
<version>1.5</version>
<scope>test</scope>
</dependency>
</dependencies>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.build.targetEncoding>UTF-8</project.build.targetEncoding>
<maven.build.timestamp.format>yyyyMMdd-HHmm</maven.build.timestamp.format>
<timestamp>${maven.build.timestamp}</timestamp>
</properties>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<excludes>
<exclude>demo/**.java</exclude>
</excludes>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-resources-plugin</artifactId>
<version>2.5</version>
</plugin>
</plugins>
<resources>
<resource>
<directory>src/main/resources</directory>
<filtering>true</filtering>
<includes>
<include>**/*.properties</include>
</includes>
</resource>
<resource>
<directory>src/main/resources</directory>
<filtering>false</filtering>
<includes>
<include>**/*.cif.gz</include>
<include>**/*.pdb</include>
<include>**/*.mat</include>
<include>**/*.xml</include>
</includes>
</resource>
</resources>
</build>
</project>