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BioJavaAADemo.java
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42 lines (35 loc) · 1.19 KB
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/*
* BioJava development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public Licence. This should
* be distributed with the code. If you do not have a copy,
* see:
*
* http://www.gnu.org/copyleft/lesser.html
*
* Copyright for this code is held jointly by the individual
* authors. These should be listed in @author doc comments.
*
* For more information on the BioJava project and its aims,
* or to join the biojava-l mailing list, visit the home page
* at:
*
* http://www.biojava.org/
*
*/
package demo;
import org.biojava.nbio.aaproperties.IPeptideProperties;
import org.biojava.nbio.aaproperties.PeptidePropertiesImpl;
import org.biojava.nbio.core.exceptions.CompoundNotFoundException;
import org.biojava.nbio.core.sequence.ProteinSequence;
/**
* Created by andreas on 8/9/14.
*/
public class BioJavaAADemo {
public static void main(String[] args) throws CompoundNotFoundException {
ProteinSequence pSequence = new ProteinSequence("VLSPADKTNVKAAWGKVGAHAG");
IPeptideProperties pp = new PeptidePropertiesImpl();
System.out.println("Peptide Properties: " + pp.getIsoelectricPoint(pSequence));
}
}