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onbiojava-3.0.8

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Commits on Mar 25, 2014

• also moving files needed for tests

  andreasprlic

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Commits on Mar 24, 2014

• more refactoring of junit tests, slow tests go to integration test module

  andreasprlic

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• moving slow running unit tests into integrationtests package

  andreasprlic

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Commits on Mar 21, 2014

• need to make sure the setup is called before every test, if run the first time, otherwise problems with seqres alignment #106

  andreasprlic

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• fixing another problem with seqres and ATOM mapping #106

  andreasprlic

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Commits on Mar 20, 2014

• only update original seqres groups, when matching worked without problems

  andreasprlic

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• Merging with trunk

  pwrose

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• Added bond generation for mmCIF files

  pwrose

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Commits on Mar 19, 2014

• fixing NPE with TestBonds #103

  andreasprlic

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Commits on Mar 18, 2014

• Merge branch 'testsissue'

  andreasprlic

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• resolving #76 fixing problem when parsing altLocs

  andreasprlic

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• merging fix for loading issue from sbliven

  andreasprlic

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  9ae711d

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• resolving merge conflict

  andreasprlic

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• Merge branch 'master' of github.com:andreasprlic/biojava

  andreasprlic

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• fixing problem when displaying IDs of different length

  andreasprlic

  committed
  d01e0e9

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• Improving TestAltLocs and fixing issue with SiftsChainToUniprotMapping

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  josemduarte

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Commits on Mar 14, 2014

• Merge remote-tracking branch 'main/master'

  sbliven

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  a77b675

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• Minor bug fixes

  sbliven

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• Expanding ~ in StructureTools.getStructure paths

  sbliven

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Commits on Mar 7, 2014

• Test

  pwrose

  committed
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• fixing #99

  andreasprlic

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• resolving #100

  andreasprlic

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• Merge pull request #97 from pwrose/master

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  pwrose

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• Factored out code that makes polymer and intra-group bonds into its own

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  pwrose

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Commits on Mar 6, 2014

• Merge pull request #95 from josemduarte/master

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  sbliven

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• Merge pull request #96 from pwrose/master

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  pwrose

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• Added Java Bean for mmcif category _struct_conn

  pwrose

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Commits on Mar 3, 2014

• Merge branch 'master' of https://github.com/biojava/biojava

  josemduarte

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• Full implementation of ASA calculation including a unit test

  josemduarte

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• Undoing bf4787bc:

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  sbliven

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Commits on Feb 28, 2014

• a couple of more fixes to the junit tests for #76

  andreasprlic

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• Merge branch 'master' of https://github.com/biojava/biojava

  josemduarte

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• Missing in last commit

  josemduarte

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• First implementation of ASA calculation

  josemduarte

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  4e133f2

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• another patch needed to make sure the fix for #76 works

  andreasprlic

  committed
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