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gridspec.py
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"""
:mod:`~matplotlib.gridspec` is a module which specifies the location
of the subplot in the figure.
``GridSpec``
specifies the geometry of the grid that a subplot will be
placed. The number of rows and number of columns of the grid
need to be set. Optionally, the subplot layout parameters
(e.g., left, right, etc.) can be tuned.
``SubplotSpec``
specifies the location of the subplot in the given *GridSpec*.
"""
from __future__ import (absolute_import, division, print_function,
unicode_literals)
import six
from six.moves import zip
import matplotlib
rcParams = matplotlib.rcParams
import matplotlib.transforms as mtransforms
import numpy as np
import warnings
class GridSpecBase(object):
"""
A base class of GridSpec that specifies the geometry of the grid
that a subplot will be placed.
"""
def __init__(self, nrows, ncols,
height_ratios=None, width_ratios=None):
"""
The number of rows and number of columns of the grid need to
be set. Optionally, the ratio of heights and widths of rows and
columns can be specified.
"""
#self.figure = figure
self._nrows , self._ncols = nrows, ncols
self.set_height_ratios(height_ratios)
self.set_width_ratios(width_ratios)
def get_geometry(self):
'get the geometry of the grid, e.g., 2,3'
return self._nrows, self._ncols
def get_subplot_params(self, fig=None):
pass
def new_subplotspec(self, loc, rowspan=1, colspan=1):
"""
create and return a SuplotSpec instance.
"""
loc1, loc2 = loc
subplotspec = self[loc1:loc1+rowspan, loc2:loc2+colspan]
return subplotspec
def set_width_ratios(self, width_ratios):
if width_ratios is not None and len(width_ratios) != self._ncols:
raise ValueError('Expected the given number of width ratios to '
'match the number of columns of the grid')
self._col_width_ratios = width_ratios
def get_width_ratios(self):
return self._col_width_ratios
def set_height_ratios(self, height_ratios):
if height_ratios is not None and len(height_ratios) != self._nrows:
raise ValueError('Expected the given number of height ratios to '
'match the number of rows of the grid')
self._row_height_ratios = height_ratios
def get_height_ratios(self):
return self._row_height_ratios
def get_grid_positions(self, fig):
"""
return lists of bottom and top position of rows, left and
right positions of columns.
"""
nrows, ncols = self.get_geometry()
subplot_params = self.get_subplot_params(fig)
left = subplot_params.left
right = subplot_params.right
bottom = subplot_params.bottom
top = subplot_params.top
wspace = subplot_params.wspace
hspace = subplot_params.hspace
totWidth = right-left
totHeight = top-bottom
# calculate accumulated heights of columns
cellH = totHeight/(nrows + hspace*(nrows-1))
sepH = hspace*cellH
if self._row_height_ratios is not None:
netHeight = cellH * nrows
tr = float(sum(self._row_height_ratios))
cellHeights = [netHeight*r/tr for r in self._row_height_ratios]
else:
cellHeights = [cellH] * nrows
sepHeights = [0] + ([sepH] * (nrows-1))
cellHs = np.add.accumulate(np.ravel(list(zip(sepHeights, cellHeights))))
# calculate accumulated widths of rows
cellW = totWidth/(ncols + wspace*(ncols-1))
sepW = wspace*cellW
if self._col_width_ratios is not None:
netWidth = cellW * ncols
tr = float(sum(self._col_width_ratios))
cellWidths = [netWidth*r/tr for r in self._col_width_ratios]
else:
cellWidths = [cellW] * ncols
sepWidths = [0] + ([sepW] * (ncols-1))
cellWs = np.add.accumulate(np.ravel(list(zip(sepWidths, cellWidths))))
figTops = [top - cellHs[2*rowNum] for rowNum in range(nrows)]
figBottoms = [top - cellHs[2*rowNum+1] for rowNum in range(nrows)]
figLefts = [left + cellWs[2*colNum] for colNum in range(ncols)]
figRights = [left + cellWs[2*colNum+1] for colNum in range(ncols)]
return figBottoms, figTops, figLefts, figRights
def __getitem__(self, key):
"""
create and return a SuplotSpec instance.
"""
nrows, ncols = self.get_geometry()
total = nrows*ncols
if isinstance(key, tuple):
try:
k1, k2 = key
except ValueError:
raise ValueError("unrecognized subplot spec")
if isinstance(k1, slice):
row1, row2, _ = k1.indices(nrows)
else:
if k1 < 0:
k1 += nrows
if k1 >= nrows or k1 < 0 :
raise IndexError("index out of range")
row1, row2 = k1, k1+1
if isinstance(k2, slice):
col1, col2, _ = k2.indices(ncols)
else:
if k2 < 0:
k2 += ncols
if k2 >= ncols or k2 < 0 :
raise IndexError("index out of range")
col1, col2 = k2, k2+1
num1 = row1*ncols + col1
num2 = (row2-1)*ncols + (col2-1)
# single key
else:
if isinstance(key, slice):
num1, num2, _ = key.indices(total)
num2 -= 1
else:
if key < 0:
key += total
if key >= total or key < 0 :
raise IndexError("index out of range")
num1, num2 = key, None
return SubplotSpec(self, num1, num2)
class GridSpec(GridSpecBase):
"""
A class that specifies the geometry of the grid that a subplot
will be placed. The location of grid is determined by similar way
as the SubplotParams.
"""
def __init__(self, nrows, ncols,
left=None, bottom=None, right=None, top=None,
wspace=None, hspace=None,
width_ratios=None, height_ratios=None):
"""
The number of rows and number of columns of the
grid need to be set. Optionally, the subplot layout parameters
(e.g., left, right, etc.) can be tuned.
"""
#self.figure = figure
self.left=left
self.bottom=bottom
self.right=right
self.top=top
self.wspace=wspace
self.hspace=hspace
GridSpecBase.__init__(self, nrows, ncols,
width_ratios=width_ratios,
height_ratios=height_ratios)
#self.set_width_ratios(width_ratios)
#self.set_height_ratios(height_ratios)
_AllowedKeys = ["left", "bottom", "right", "top", "wspace", "hspace"]
def update(self, **kwargs):
"""
Update the current values. If any kwarg is None, default to
the current value, if set, otherwise to rc.
"""
for k, v in six.iteritems(kwargs):
if k in self._AllowedKeys:
setattr(self, k, v)
else:
raise AttributeError("%s is unknown keyword" % (k,))
from matplotlib import _pylab_helpers
from matplotlib.axes import SubplotBase
for figmanager in six.itervalues(_pylab_helpers.Gcf.figs):
for ax in figmanager.canvas.figure.axes:
# copied from Figure.subplots_adjust
if not isinstance(ax, SubplotBase):
# Check if sharing a subplots axis
if ax._sharex is not None and isinstance(ax._sharex, SubplotBase):
if ax._sharex.get_subplotspec().get_gridspec() == self:
ax._sharex.update_params()
ax.set_position(ax._sharex.figbox)
elif ax._sharey is not None and isinstance(ax._sharey,SubplotBase):
if ax._sharey.get_subplotspec().get_gridspec() == self:
ax._sharey.update_params()
ax.set_position(ax._sharey.figbox)
else:
ss = ax.get_subplotspec().get_topmost_subplotspec()
if ss.get_gridspec() == self:
ax.update_params()
ax.set_position(ax.figbox)
def get_subplot_params(self, fig=None):
"""
return a dictionary of subplot layout parameters. The default
parameters are from rcParams unless a figure attribute is set.
"""
from matplotlib.figure import SubplotParams
import copy
if fig is None:
kw = dict([(k, rcParams["figure.subplot."+k]) \
for k in self._AllowedKeys])
subplotpars = SubplotParams(**kw)
else:
subplotpars = copy.copy(fig.subplotpars)
update_kw = dict([(k, getattr(self, k)) for k in self._AllowedKeys])
subplotpars.update(**update_kw)
return subplotpars
def locally_modified_subplot_params(self):
return [k for k in self._AllowedKeys if getattr(self, k)]
def tight_layout(self, fig, renderer=None, pad=1.08, h_pad=None, w_pad=None, rect=None):
"""
Adjust subplot parameters to give specified padding.
Parameters:
pad : float
padding between the figure edge and the edges of subplots, as a fraction of the font-size.
h_pad, w_pad : float
padding (height/width) between edges of adjacent subplots.
Defaults to `pad_inches`.
rect : if rect is given, it is interpreted as a rectangle
(left, bottom, right, top) in the normalized figure
coordinate that the whole subplots area (including
labels) will fit into. Default is (0, 0, 1, 1).
"""
from .tight_layout import (get_subplotspec_list,
get_tight_layout_figure,
get_renderer)
subplotspec_list = get_subplotspec_list(fig.axes, grid_spec=self)
if None in subplotspec_list:
warnings.warn("This figure includes Axes that are not "
"compatible with tight_layout, so its "
"results might be incorrect.")
if renderer is None:
renderer = get_renderer(fig)
kwargs = get_tight_layout_figure(fig, fig.axes, subplotspec_list,
renderer,
pad=pad, h_pad=h_pad, w_pad=w_pad,
rect=rect,
)
self.update(**kwargs)
class GridSpecFromSubplotSpec(GridSpecBase):
"""
GridSpec whose subplot layout parameters are inherited from the
location specified by a given SubplotSpec.
"""
def __init__(self, nrows, ncols,
subplot_spec,
wspace=None, hspace=None,
height_ratios=None, width_ratios=None):
"""
The number of rows and number of columns of the grid need to
be set. An instance of SubplotSpec is also needed to be set
from which the layout parameters will be inherited. The wspace
and hspace of the layout can be optionally specified or the
default values (from the figure or rcParams) will be used.
"""
self._wspace=wspace
self._hspace=hspace
self._subplot_spec = subplot_spec
GridSpecBase.__init__(self, nrows, ncols,
width_ratios=width_ratios,
height_ratios=height_ratios)
def get_subplot_params(self, fig=None):
"""
return a dictionary of subplot layout parameters.
"""
if fig is None:
hspace = rcParams["figure.subplot.hspace"]
wspace = rcParams["figure.subplot.wspace"]
else:
hspace = fig.subplotpars.hspace
wspace = fig.subplotpars.wspace
if self._hspace is not None:
hspace = self._hspace
if self._wspace is not None:
wspace = self._wspace
figbox = self._subplot_spec.get_position(fig, return_all=False)
left, bottom, right, top = figbox.extents
from matplotlib.figure import SubplotParams
sp = SubplotParams(left=left,
right=right,
bottom=bottom,
top=top,
wspace=wspace,
hspace=hspace)
return sp
def get_topmost_subplotspec(self):
'get the topmost SubplotSpec instance associated with the subplot'
return self._subplot_spec.get_topmost_subplotspec()
class SubplotSpec(object):
"""
specifies the location of the subplot in the given *GridSpec*.
"""
def __init__(self, gridspec, num1, num2=None):
"""
The subplot will occupy the num1-th cell of the given
gridspec. If num2 is provided, the subplot will span between
num1-th cell and num2-th cell.
The index stars from 0.
"""
rows, cols = gridspec.get_geometry()
total = rows*cols
self._gridspec = gridspec
self.num1 = num1
self.num2 = num2
def get_gridspec(self):
return self._gridspec
def get_geometry(self):
"""
get the subplot geometry, e.g., 2,2,3. Unlike SuplorParams,
index is 0-based
"""
rows, cols = self.get_gridspec().get_geometry()
return rows, cols, self.num1, self.num2
def get_position(self, fig, return_all=False):
"""
update the subplot position from fig.subplotpars
"""
gridspec = self.get_gridspec()
nrows, ncols = gridspec.get_geometry()
figBottoms, figTops, figLefts, figRights = \
gridspec.get_grid_positions(fig)
rowNum, colNum = divmod(self.num1, ncols)
figBottom = figBottoms[rowNum]
figTop = figTops[rowNum]
figLeft = figLefts[colNum]
figRight = figRights[colNum]
if self.num2 is not None:
rowNum2, colNum2 = divmod(self.num2, ncols)
figBottom2 = figBottoms[rowNum2]
figTop2 = figTops[rowNum2]
figLeft2 = figLefts[colNum2]
figRight2 = figRights[colNum2]
figBottom = min(figBottom, figBottom2)
figLeft = min(figLeft, figLeft2)
figTop = max(figTop, figTop2)
figRight = max(figRight, figRight2)
figbox = mtransforms.Bbox.from_extents(figLeft, figBottom,
figRight, figTop)
if return_all:
return figbox, rowNum, colNum, nrows, ncols
else:
return figbox
def get_topmost_subplotspec(self):
'get the topmost SubplotSpec instance associated with the subplot'
gridspec = self.get_gridspec()
if hasattr(gridspec, "get_topmost_subplotspec"):
return gridspec.get_topmost_subplotspec()
else:
return self
def __eq__(self, other):
# check to make sure other has the attributes
# we need to do the comparison
if not (hasattr(other, '_gridspec') and
hasattr(other, 'num1') and
hasattr(other, 'num2')):
return False
return all((self._gridspec == other._gridspec,
self.num1 == other.num1,
self.num2 == other.num2))
def __hash__(self):
return (hash(self._gridspec) ^
hash(self.num1) ^
hash(self.num2))