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base repository: biojava/biojava
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head repository: jnorthrup/biojava
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compare: master
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  • 19 commits
  • 1,045 files changed
  • 6 contributors

Commits on Jun 10, 2019

  1. Fixed Line Length bug

    @r614
    r614 committed Jun 10, 2019
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Commits on Oct 1, 2019

  1. Update .gitattributes

    @bagasfadhil
    bagasfadhil authored Oct 1, 2019
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Commits on Feb 11, 2020

  1. Use HTTPS instead of HTTP to resolve dependencies 

    This fixes a security vulnerability in this project where the `pom.xml`
files were configuring Maven to resolve dependencies over HTTP instead of
HTTPS.

Signed-off-by: Jonathan Leitschuh <Jonathan.Leitschuh@gmail.com>
    @JLLeitschuh
    JLLeitschuh committed Feb 11, 2020
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Commits on Mar 7, 2020

  1. dependency upgrades (untested)

    me committed Mar 7, 2020
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  2. automated IDE cleanups and some possible bug fixes

    me committed Mar 7, 2020
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  3. cleanup continued; core and structure unit tests still pass, other mo… 

    …dules untested
    me committed Mar 7, 2020
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  4. updates

    me committed Mar 7, 2020
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  5. updates

    me committed Mar 7, 2020
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Commits on Mar 8, 2020

  1. updates

    me committed Mar 8, 2020
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  2. updates

    me committed Mar 8, 2020
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  3. updates

    me committed Mar 8, 2020
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  4. updates

    me committed Mar 8, 2020
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  5. central URL cache using OKHttp3, partially working

    me committed Mar 8, 2020
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Commits on Mar 11, 2020

  1. Merge pull request #1 from automenta/master 

    http cache plus "updates" from "me"
    @jnorthrup
    jnorthrup authored Mar 11, 2020
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  2. Merge branch 'interface-finder' of https://github.com/josemduarte/bio… 

    …java into josemduarte-interface-finder

# Conflicts:
#	biojava-structure/src/main/java/org/biojava/nbio/structure/StructureTools.java
    Jim Northrup committed Mar 11, 2020
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  3. Merge pull request #3 from JLLeitschuh/fix/JLL/use_https_to_resolve_d… 

    …ependencies

Use HTTPS instead of HTTP to resolve dependencies
    @jnorthrup
    jnorthrup authored Mar 11, 2020
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  4. Merge pull request #4 from bagasfadhil/bagasfadhil-patch-1 

    Update .gitattributes
    @jnorthrup
    jnorthrup authored Mar 11, 2020
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  5. Merge pull request #5 from r614/master 

    Fixed Line Length bug
    @jnorthrup
    jnorthrup authored Mar 11, 2020
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  6. enable a non-signed build to run shellscripted demo in bin/; or for t… 

    …hat main class to be specified in bash.
    Jim Northrup committed Mar 11, 2020
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