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1. riser riser Public

   Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing

   Python 15 5

2. R2Dtool R2Dtool Public

   Analyse RNA feature distributions.

   Jupyter Notebook 19 4

3. RATTLE RATTLE Public

   Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

   C++ 60 10

4. SUPPA SUPPA Public

   SUPPA: Fast quantification of splicing and differential splicing

   Python 293 62

5. SWARM SWARM Public

   Single-molecule Workflow for Analysing RNA Modifications

   C++ 8 1

6. modkitopt modkitopt Public

   Optimise modkit parameters and stoichiometry cutoff for accurate nanopore-based RNA modification detection

   Nextflow 6