changing behaviour for remediate files. Force update remediation does not make sense at this stage.

andreasprlic · andreasprlic · commit ef5c9d7fa746 · 2015-02-17T15:15:32.000-08:00
diff --git a/biojava-structure/src/main/java/org/biojava/nbio/structure/align/client/FarmJobRunnable.java b/biojava-structure/src/main/java/org/biojava/nbio/structure/align/client/FarmJobRunnable.java
@@ -133,10 +133,8 @@ public FarmJobRunnable(FarmJobParameters params){
 			ScopFactory.setScopDatabase(scop);
 			
 		}
-		
-		
-		// enforce to replace remediated files with new versions...
-		cache.setFetchBehavior(FetchBehavior.FETCH_REMEDIATED);
+
+		cache.setFetchBehavior(FetchBehavior.FETCH_FILES);
 		
 		maxNrAlignments = params.getNrAlignments();
 		progressListeners = null;
