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Commits on Jan 8, 2016

• #360 improving class and method names

  andreasprlic

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Commits on Dec 1, 2015

• Adding biojava license statements

  sbliven

  committed
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Commits on Nov 30, 2015

• Set the default minimum SSE per subunit to 2

  lafita

  committed
  a34c8e1

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• Add and update CESymmParameters

  lafita

  committed
  f85b5b4

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• Format and improve SS support

  lafita

  committed
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Commits on Oct 19, 2015

• Implement new output printing methods for SS

  lafita

  committed
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• New Demo on how to use the DSSP implementation

  lafita

  committed
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• Update DemoLoadSecStruc with new features

  lafita

  committed
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Commits on Oct 5, 2015

• Decouple SS annotation from AminoAcid interface

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  lafita

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Commits on Sep 30, 2015

• Include the random coil annotation in SS parsing

  lafita

  committed
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Commits on Sep 29, 2015

• Modify the API for SS parsing and storage

  lafita

  committed
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Commits on Sep 16, 2015

• adding support for parsing sequence mismatched into Chain class

  andreasprlic

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Commits on Aug 11, 2015

• Add demo for point group internal symmetry calculation

  lafita

  committed
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Commits on Aug 7, 2015

• Unimplement StructureAlignment in CeSymm

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  lafita

  committed
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Commits on Aug 4, 2015

• Allow non-refined result, only self-alignment

  lafita

  committed
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• Fix demo issues

  lafita

  committed
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Commits on Aug 3, 2015

• Add Demo for CeSymm

  lafita

  committed
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Commits on Jul 24, 2015

• Fix bug with flexible MultipleAlignments

  lafita

  committed
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Commits on Jul 16, 2015

• Organize MultipleAlignment code in a util package

  lafita

  committed
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Commits on Jul 8, 2015

• Implement XML Converter and Parser for MultipleAlignments

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  lafita

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Commits on Jul 7, 2015

• Add more examples for the MultipleAlignment algorithm

  lafita

  committed
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Commits on Jul 1, 2015

• Create Multiple Alignment GUI

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  lafita

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Commits on Jun 25, 2015

• Clean Demos for Multiple Alignments

  lafita

  committed
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Commits on Jan 30, 2015

• fixing imports

  andreasprlic

  committed
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• Refactoring of all package names according to #245 #242 #240

  andreasprlic

  committed
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Commits on Jan 29, 2015

• Ran Optimize Imports across the whole project.

  andreasprlic

  committed
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• Major refactoring of package names in accordance with #245 #242 #240

  andreasprlic

  committed
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