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@StanfordMIMI

Stanford MIMI Lab

Official GitHub repository for the Stanford Machine Intelligence in Medical Imaging Group, led by Dr. Akshay Chaudhari

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  1. skm-tea skm-tea Public

    Repository for the Stanford Knee MRI Multi-Task Evaluation (SKM-TEA) Dataset

    Python 96 19

  2. DDM2 DDM2 Public

    [ICLR2023] Official repository of DDM2: Self-Supervised Diffusion MRI Denoising with Generative Diffusion Models

    Python 190 26

  3. Comp2Comp Comp2Comp Public

    Computed tomography to body composition (Comp2Comp).

    Python 110 25

  4. MedVAE MedVAE Public

    [MIDL 2025] Efficient Automated Interpretation of Medical Images with Large-Scale Generalizable Autoencoders

    Python 176 15

  5. clin-summ clin-summ Public

    Clinical text summarization by adapting large language models

    Python 156 33

  6. Merlin Merlin Public

    [Nature 2026] Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured radiology reports for pretraining.

    Python 268 26

Repositories

Showing 10 of 27 repositories
  • Merlin Public

    [Nature 2026] Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured radiology reports for pretraining.

    StanfordMIMI/Merlin’s past year of commit activity
    Python 268 MIT 26 0 0 Updated Mar 5, 2026
  • clinician-ai-collaboration Public
    StanfordMIMI/clinician-ai-collaboration’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Feb 27, 2026
  • MedVAE Public

    [MIDL 2025] Efficient Automated Interpretation of Medical Images with Large-Scale Generalizable Autoencoders

    StanfordMIMI/MedVAE’s past year of commit activity
    Python 176 MIT 15 0 0 Updated Feb 20, 2026
  • SemanticBridge Public

    Self-Supervised Semantic Bridge for Unpaired Image-to-Image Translation

    StanfordMIMI/SemanticBridge’s past year of commit activity
    10 0 0 0 Updated Feb 11, 2026
  • dspy-helm Public

    Structured Prompting Enables More Robust Evaluation of Language Models

    StanfordMIMI/dspy-helm’s past year of commit activity
    Python 10 MIT 4 0 0 Updated Jan 18, 2026
  • Comp2Comp Public

    Computed tomography to body composition (Comp2Comp).

    StanfordMIMI/Comp2Comp’s past year of commit activity
    Python 110 Apache-2.0 25 27 3 Updated Jan 6, 2026
  • MedVAL Public

    Toward Expert-Level Medical Text Validation with Language Models

    StanfordMIMI/MedVAL’s past year of commit activity
    Python 17 MIT 1 0 0 Updated Oct 23, 2025
  • RoentGen-v2 Public

    Improving Performance, Robustness, and Fairness of Radiographic AI Models with Finely-Controllable Synthetic Data

    StanfordMIMI/RoentGen-v2’s past year of commit activity
    Python 21 MIT 1 2 0 Updated Sep 12, 2025
  • LieRE Public

    [ICML-2025] We introduce Lie group Relative position Encodings (LieRE) that goes beyond RoPE in supporting n-dimensional inputs.

    StanfordMIMI/LieRE’s past year of commit activity
    Python 30 MIT 0 0 0 Updated Aug 13, 2025
  • CheXalign Public

    [ACL-2025] CheXalign: Preference fine-tuning in chest X-ray interpretation models without human feedback

    StanfordMIMI/CheXalign’s past year of commit activity
    Python 4 Apache-2.0 0 0 0 Updated Aug 3, 2025
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