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feat: Add GitHub integration, code visualization, security scanning, performance profiling, and custom rules#667

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magic-peach wants to merge 1 commit intoCodeGraphContext:mainfrom
magic-peach:feature/issue-662-github-integration
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feat: Add GitHub integration, code visualization, security scanning, performance profiling, and custom rules#667
magic-peach wants to merge 1 commit intoCodeGraphContext:mainfrom
magic-peach:feature/issue-662-github-integration

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@magic-peach
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Summary

This PR implements five major feature requests for CodeGraphContext:

GitHub Integration (Issue #662)

  • OAuth authentication flow
  • Repository import from GitHub
  • Commit history analysis
  • Pull request tracking
  • Issue synchronization

Code Visualization Graphs (Issue #663)

  • Call graph visualization
  • Class diagram visualization
  • Dependency tree visualization
  • Interactive exploration via HTML visualization

Security Vulnerability Scanning (Issue #664)

  • Secret detection (API keys, tokens, passwords, private keys)
  • Vulnerability detection (SQL injection, hardcoded credentials, eval usage, etc.)
  • Dependency scanning for known vulnerabilities
  • Security reports with severity levels

Performance Profiling Tools (Issue #665)

  • Complexity analysis
  • Performance bottleneck detection
  • Optimization suggestions
  • Cyclomatic complexity metrics

Custom Rule Definitions (Issue #666)

  • Rule definition syntax with regex patterns
  • Custom severity levels (error, warning, info)
  • Rule testing and application
  • Rule sharing via JSON export/import

Changes Made

  • Added github_integration.py for GitHub API interactions
  • Added handler modules for each feature:
    • github_handlers.py
    • visualization_handlers.py
    • security_handlers.py
    • performance_handlers.py
    • custom_rules_handlers.py
  • Updated tool_definitions.py with new tools
  • Updated server.py with new tool wrappers and routing
  • Added requests dependency to pyproject.toml

Testing

  • Syntax validated for all new Python files
  • Code follows existing project conventions
  • All tools properly integrated into the MCP server

Closes #662, #663, #664, #665, #666

…performance profiling, and custom rules

- Implement GitHub integration with OAuth, repository import, commit analysis, PR tracking, and issue sync
- Add code visualization graphs: call graphs, class diagrams, dependency trees
- Add security vulnerability scanning: secret detection, vulnerability detection, dependency scanning
- Add performance profiling tools: complexity analysis, bottleneck detection, optimization suggestions
- Add custom rule definitions: rule syntax, pattern matching, severity levels, rule testing, rule sharing

Closes CodeGraphContext#662, CodeGraphContext#663, CodeGraphContext#664, CodeGraphContext#665, CodeGraphContext#666
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feat: Add GitHub integration

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